1. Guided extraction of genome-scale metabolic models for the integration and analysis of omics dataAndrew Walakira, Damjana Rozman, Tadeja Režen, Miha Mraz, Miha Moškon, 2021, izvirni znanstveni članek Ključne besede: genome-scale metabolic model, model extraction methods, context-specific metabolic model, omics data integration, subsystem enrichment analysis, model interpretability Celotno besedilo (datoteka, 1,95 MB) Gradivo ima več datotek! Več... |
2. Towards a data-integrated cellNoël Malod-Dognin, Julia Petschnigg, Sam F. L. Windels, Janez Povh, Harry Hemmingway, Robin Ketteler, Nataša Pržulj, 2019, izvirni znanstveni članek Ključne besede: non-negative matrix factorization, data integration, cancer-related genes, pan-cancer genes, integrated cell, biological networks Celotno besedilo (datoteka, 1,39 MB) Gradivo ima več datotek! Več... |
3. Embedding to Reference t-SNE Space Addresses Batch Effects in Single-Cell ClassificationPavlin Gregor Poličar, 2019, magistrsko delo/naloga Ključne besede: batch effects, embedding, t-SNE, visualization, single-cell transcriptomics, data integration, domain adaptation Celotno besedilo (datoteka, 16,34 MB) |
4. Transcriptomics of receptive endometrium in women with sonographic features of adenomyosisErika Prašnikar, Tanja Kunej, Mario Gorenjak, Uroš Potočnik, Borut Kovačič, Jure Knez, 2022, izvirni znanstveni članek Ključne besede: adenomyosis, assisted reproductive techniques (ART), data integration, endometrial receptivity, enrichment pathway analysis, omics approaches, RNA-seq, systems biology, transcriptomics, window of implantation Celotno besedilo (datoteka, 3,76 MB) Gradivo ima več datotek! Več... |
5. Bioinformatics integration of microbiome and metabolomics data in the translational contextLeon Deutsch, 2022, doktorska disertacija Ključne besede: bioinformatics, metabolomics, metagenomcis, physical inactivity, data integration, systems biology, microbiome, urine, nuclear magnetic spectrometry Celotno besedilo (datoteka, 30,37 MB) |
6. QuNexJie Lisa Ji, Jure Demšar, Aleksij Kraljič, Andraž Matkovič, Nina Purg, Grega Repovš, 2023, izvirni znanstveni članek Ključne besede: neuroimaging, data processing, functional MRI, diffusion MRI, multi-modal analyses, containerization, cloud integration, high-performance computing, functional magnetic resonance imaging fMRI, analysis, brain, diffusion Celotno besedilo (datoteka, 2,59 MB) Gradivo ima več datotek! Več... |