1. Inhibition of the SARS-CoV-2 3CL$^{pro}$ main protease by plant polyphenolsMiha Bahun, Marko Jukič, Domen Oblak, Luka Kranjc, Gregor Bajc, Matej Butala, Krištof Bozovičar, Tomaž Bratkovič, Črtomir Podlipnik, Nataša Poklar Ulrih, 2022, original scientific article Keywords: edible plants, polyphenols, COVID-19, SARS-CoV-2, 3CL$^{pro}$, protease inhibitor Full text (file, 2,14 MB) This document has more files! More... |
2. Prioritisation of compounds for 3CL$^{pro}$ inhibitor development on SARS-CoV-2 variantsMarko Jukič, Blaž Škrlj, Gašper Tomšič, Sebastian Pleško, Črtomir Podlipnik, Urban Bren, 2021, original scientific article Keywords: COVID-19, SARS-CoV-2, free-energy calculations, in silico drug design, virtual screening, inhibitors, 3C-like protease, M$^{pro}$, 3CL$^{pro}$, high-throughput, chemical library design, machine learning, compound prioritisation Full text (file, 6,56 MB) This document has more files! More... |
3. A set of experimentally validated decoys for the human CC chemokine receptor 7 (CCR7) obtained by virtual screeningMatic Proj, Steven De Jonghe, Tom Van Loy, Marko Jukič, Anže Meden, Luka Ciber, Črtomir Podlipnik, Uroš Grošelj, Janez Konc, Dominique Schols, Stanislav Gobec, 2022, original scientific article Keywords: virtual screening, decoys, chemical library, computer-aided drug design, CCR7, GPCR Full text (file, 2,30 MB) This document has more files! More... |
4. Chitin-binding protein of Verticillium nonalfalfae disguises fungus from plant chitinases and suppresses chitin-triggered host immunityHelena Volk, Kristina Marton, Marko Flajšman, Sebastjan Radišek, Hui Tian, Ingo Hein, Črtomir Podlipnik, Bart P. H. J. Thomma, Katarina Košmelj, Branka Javornik, Sabina Berne, 2019, original scientific article Keywords: fungal effectors, fungus–plant interactions, mechanisms of pathogenicity Full text (file, 1,43 MB) This document has more files! More... |
5. Iodine-catalysed dissolution of elemental gold in ethanolAnže Zupanc, Eeva Heliövaara, Karina Moslova, Aleksi Eronen, Marianna Kemell, Črtomir Podlipnik, Marjan Jereb, Timo Repo, 2022, original scientific article Keywords: gold, iodine, sustainable chemistry, catalysis, recycling Full text (file, 2,72 MB) This document has more files! More... |
6. Binding-induced diversity of a human telomeric G-quadruplex stability phase spaceDomen Oblak, San Hadži, Črtomir Podlipnik, Jurij Lah, 2022, original scientific article Keywords: G-quadruplex, G-quadruplex stability, G-quadruplex ligand binding, G-quadruplex structure, thermodynamics, DSC, human telomere repeat Full text (file, 18,01 MB) This document has more files! More... |
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10. Napovedni modeli za identifikacijo potencialnih inhibitorjev različnih proteinov virusa eboleVita Hudi, 2020, master's thesis Keywords: Ebola, ebolavirus, zdravila, virtualno rešetanje, molekulsko sidranje, QSAR, QSPR, napovedni modeli, multivariatna linearna regresija Full text (file, 6,02 MB) |