41. Analiza transkriptoma plodu oljke (Olea europaea L.) s pirosekvenciranjemTjaša Rešetič, 2013, doctoral dissertation Keywords: Olea europaea, oljka, Istrska belica, plodovi oljk, nukleotidna zaporedja, cDNA knjižnica, komplementarna DNA, pirosekvenciranje, PCR metode, transkriptom, geni, biotehnologija, genetika, disertacije
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42. Proučevanje bolezni razbrazdanja lesa vinske trte (Vitis spp.) na nivoju transkriptoma in karakterizacija tipov sorte žlahtne vinske trte Refošk (Vitis vinifera L.)Matjaž Hladnik, 2014, doctoral dissertation Keywords: molekulski markerji, AFLP, znotraj sortna variabilnost, Refošk, inedksiranje, bolezni rastlin, razbrazdanja lesa, izraženost genov, ampelografija, cepljenje, vinska trta, disertacije
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43. Identifikacija genov za odpornost na hmeljevo uvelostAljaž Majer, 2014, doctoral dissertation Keywords: molekularna genetika, odpornost rastlin, molekulski markerji, hmelj, hmeljeva uvelost, glivične bolezni rastlin, Verticillium albo-atrum, geni za odpornost
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44. A method for targeting a specified segment of DNA to a bacterial microorganelleJan Otoničar, Maja Hostnik, Maja Grundner, Rok Kostanjšek, Tajda Gredar, Maja Garvas, Zoran Arsov, Zdravko Podlesek, Cene Gostinčar, Jernej Jakše, Steve J. W. Busby, Matej Butala, 2022, original scientific article Keywords: DNA, physical characterisation, biochemical characterisation
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45. RNA interference core components identified and characterised in Verticillium nonalfalfae, a vascular wilt pathogenic plant fungi of hopsTaja Jeseničnik, Nataša Štajner, Sebastjan Radišek, Jernej Jakše, 2019, original scientific article Keywords: agricultural genetics, plant immunity, RNAi
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46. Integrated proteo-transcriptomic analyses reveal insights into regulation of pollen development stages and dynamics of cellular response to apple fruit crinkle viroid (AFCVd)-infection in Nicotiana tabacumAnkita Shrestha, Ajay Kumar Mishra, Jaroslav Matoušek, Lenka Steinbachová, David Potěšil, Vishnu Sukumari Nath, Praveen Awasthi, Tomáš Kocábek, Jernej Jakše, Lenka Záveská Drábková, Zbyněk Zdráhal, David Honys, Gerhard Steger, 2020, original scientific article Keywords: AFCVd propagation and eradication, viroid replication, viroid degradation, Nicotiana tabacum, male gametophyte, proteome, RNA sequencing, RT qPCR
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47. Comprehensive analysis of Verticillium nonalfalfae in silico secretome uncovers putative effector proteins expressed during hop invasionKristina Marton, Marko Flajšman, Sebastjan Radišek, Katarina Košmelj, Jernej Jakše, Branka Javornik, Sabina Berne, 2018, original scientific article Keywords: plant fungal pathogens, protein domains, Verticillium, fungal genomics, fungal genetics, proteases, plant pathogens, gene expression
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48. Virome status of preclonal candidates of grapevine varieties (Vitis vinifera L.) from the Slovenian wine-growing region Primorska as determined by high-throughput sequencingVanja Miljanić, Jernej Jakše, Urban Kunej, Denis Rusjan, Andreja Škvarč, Nataša Štajner, 2022, original scientific article Keywords: Vitis vinifera L., preclonal candidates, HTS, viruses, viroids
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49. Genetic structure and core collection of olive germplasm from Albania revealed by microsatellite markersAida Dervishi, Jernej Jakše, Hairi Ismaili, Branka Javornik, Nataša Štajner, 2021, original scientific article Keywords: Olea europaea, genetic variability, microsatellite, EST-SSR, core collection
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50. Genes involved in sex pheromone biosynthesis of Ephestia cautella, an important food storage pest, are determined by transcriptome sequencingJernej Jakše, Binu Antony, Alan Soffan, Sulieman Alfaifi, Koko D. Sutanto, Saleh A. Aldosari, Abdulrahman S. Aldawood, Arnab Pain, 2015, original scientific article Keywords: skladiščni škodljivci, spolni hormoni, feromoni, biosinteza, transkriptomska analiza, sekvencioniranje genoma, Ephestia cautella
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