1. Expression of cytokine-coding genes BMP8B, LEFTY1 and INSL5 could distinguish between ulcerative colitis and Crohn's diseaseDaša Jevšinek Skok, Nina Hauptman, Miha Jerala, Nina Zidar, 2021, izvirni znanstveni članek Ključne besede: inflammatory bowel disease, ulcerative colitis, Crohn's disease, inflammatory cytokines, expression, bioinformatics approach, experimental validation
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2. Metastatic EMT phenotype is governed by microRNA-200-mediated competing endogenous RNA networksSara Uhan, Nina Hauptman, 2022, pregledni znanstveni članek Ključne besede: epithelial–mesenchymal transition, microRNA-200 family, epigenetic factors, EMT, ceRNA, lncRNA
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3. The integrative knowledge base for miRNA-mRNA expression in colorectal cancerDaša Jevšinek Skok, Nina Hauptman, Emanuela Boštjančič, Nina Zidar, 2019, izvirni znanstveni članek Ključne besede: web aplication, RNA expression, colorectal cancer, gene expression, knowledge base, cancer genome atlas, miRNA, mRNA, gene correlation, target genes
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4. DNA methylation biomarker panels for differentiating various liver adenocarcinomas, including hepatocellular carcinoma, cholangiocarcinoma, colorectal liver metastases and pancreatic adenocarcinoma liver metastasesTina Draškovič, Branislava Ranković, Nina Zidar, Nina Hauptman, 2024, izvirni znanstveni članek Ključne besede: methylation biomarkers, gastric adenocarcinoma, lung adenocarcinoma, hepatocellular carcinoma, cholangiocarcinoma, colorectal carcinoma, pancreatic adenocarcinoma, adenocarcinoma differentiation, DNA methylation
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5. Expression of fibrosis-related genes in liver and kidney fibrosis in comparison to inflammatory bowel diseasesMiha Jerala, Nina Hauptman, Nika Kojc, Nina Zidar, 2022, izvirni znanstveni članek Ključne besede: inflammatory bowel diseases, fibrosis, Crohn’s disease, ulcerative colitis, gene expression
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7. Circulating tumor DNA methylation biomarkers for characterization and determination of the cancer origin in malignant liver tumorsTina Draškovič, Nina Zidar, Nina Hauptman, 2023, pregledni znanstveni članek Ključne besede: malignant liver tumors, liver metastases, biopsy, primary malignant liver tumors, liquid biopsy, cell-free DNA, circulating tumor DNA, tissue of origin determination, DNA methylation
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8. Circulating microRNA panels for detection of liver cancers and liver-metastasizing primary cancersBranislava Ranković, Nina Hauptman, 2023, pregledni znanstveni članek Ključne besede: circulating microRNA, liver metastases, malignant liver tumors, plasma, primary malignant liver tumors, serum, tissue of origin determination
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10. AmiCaNina Hauptman, Jože Pižem, Daša Jevšinek Skok, 2024, izvirni znanstveni članek Ključne besede: miRNA, gene, expression, cancer, correlation, gene prioritization
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