1. Retrospective investigation of listeriosis outbreaks in small ruminants using different analytical approaches for whole genome sequencing-based typing of Listeria monocytogenesBojan Papić, Darja Kušar, Irena Zdovc, Majda Golob, Mateja Pate, 2020, original scientific article Keywords: epidemiology, veterinary, Listeria monocytogenes, outbreak, whole-genome sequencine, single nucleotide polymorphism, multilocus sequence typing, sheep, goats
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2. Analysis of the global population structure of Paenibacillus larvae and outbreak investigation of American foulbrood using a stable wgMLST schemeBojan Papić, Margo Diricks, Darja Kušar, 2021, original scientific article Keywords: Paenibacillus larvae, American foulbrood, whole-genome sequencing, whole-genome multilocus sequence typing, core-genome multilocus sequence typing, whole-genome single nucleotide polymorphism, genotype, molecular sequence
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3. Harnessing omics big data in nine vertebrate species by genome-wide prioritization of sequence variants with the highest predicted deleterious effect on protein functionVita Rozman, Tanja Kunej, 2018, original scientific article Keywords: big data, potentially deleterious variants (pDelVars), orthologous potentially deleterious variants (ortho-pDelVars), PolyPhen (polymorphism phenotyping), SIFT (sorts intolerant from tolerant), single-nucleotide polymorphism (SNP)
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4. The possible influence of genetic aetiological factors on molar–incisor hypomineralisationLuka Hočevar, Jernej Kovač, Katarina Trebušak Podkrajšek, Saba Battelino, Alenka Pavlič, 2020, original scientific article Keywords: molar–incisor hypomineralisation, aetiology, single nucleotide polymorphism
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5. Dataset on amelogenesis-related genes variants (ENAM and ENAM interacting genes) and on human leukocyte antigen alleles (DQ2 and DQ8) distribution in children with and without molar–incisor hypomineralisation (MIH)Luka Hočevar, Jernej Kovač, Katarina Trebušak Podkrajšek, Saba Battelino, Alenka Pavlič, 2020, original scientific article Keywords: amelogenesis, molar–incisor hypomineralisation, MIH, genes variants, aetiology, human leukocyte antigen, amelogenesis-related genes, single nucleotide polymorphism
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7. Genomic characterization of Serbian Holstein-Friesian cattle populationMomčilo Šaran, Ljuba Štrbac, Dobrila Janković, Mihajla Djan, Snežana Trivunović, Minja Zorc, 2023, original scientific article Keywords: single nucleotide polymorphism, genetic diversity, genomic analysis, linkage disequilibrium, haplotype block
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8. Integration of genomic and transcriptomic data of inbred mouse models for polygenic obesity and leanness revealed “obese” and “lean” candidate alleles in polyadenylation signalsMartin Šimon, Špela Mikec, Nicholas M. Morton, Santosh S. Atanur, Simon Horvat, Tanja Kunej, 2024, original scientific article Keywords: alternative polyadenylation, obesity, polyadenylation signal, single nucleotide polymorphism
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9. Whole genome sequencing of mouse lines divergently selected for fatness (FLI) and leanness (FHI) revealed several genetic variants as candidates for novel obesity genesMartin Šimon, Špela Mikec, Santosh S. Atanur, Janez Konc, Nicholas M. Morton, Simon Horvat, Tanja Kunej, 2024, original scientific article Keywords: obesity, mouse models, whole-genome sequencing, single-nucleotide polymorphism
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10. Prioritization of candidate genes for the effect of Fob3b1 QTL on chromosome 15 in mouse models for polygenic obesity and leanness using integrative genomicsMartin Šimon, Tanja Kunej, Nicholas M. Morton, Simon Horvat, 2024, original scientific article Keywords: data integration, gene expression, gene prioritisation, mouse models, obesity, QTL, single nucleotide polymorphism
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