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1. Evolving a peptide
Krištof Bozovičar, Tomaž Bratkovič, 2020, review article

Keywords: peptide, combinatorial library, library design, screening, mutagenesis
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2. Prioritisation of compounds for 3CL$^{pro}$ inhibitor development on SARS-CoV-2 variants
Marko Jukič, Blaž Škrlj, Gašper Tomšič, Sebastian Pleško, Črtomir Podlipnik, Urban Bren, 2021, original scientific article

Keywords: COVID-19, SARS-CoV-2, free-energy calculations, in silico drug design, virtual screening, inhibitors, 3C-like protease, M$^{pro}$, 3CL$^{pro}$, high-throughput, chemical library design, machine learning, compound prioritisation
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3. Prototype cataloging interface based on the IFLA Library reference model (LRM). Part 1, Conceptual design
Mihela Pauman Budanović, Maja Žumer, 2021, original scientific article

Keywords: conceptual model, IFLA Library Reference Model, LRM, conceptual design, user interface design, catalogers, cataloging systems
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4. A set of experimentally validated decoys for the human CC chemokine receptor 7 (CCR7) obtained by virtual screening
Matic Proj, Steven De Jonghe, Tom Van Loy, Marko Jukič, Anže Meden, Luka Ciber, Črtomir Podlipnik, Uroš Grošelj, Janez Konc, Dominique Schols, Stanislav Gobec, 2022, original scientific article

Keywords: virtual screening, decoys, chemical library, computer-aided drug design, CCR7, GPCR
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