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1. Vzporedna simulacija problema N teles
Matej Rus, 2012, undergraduate thesis

Keywords: atom, OpenCL, problem N teles, centralna procesna enota, računalništvo, računalništvo in informatika, visokošolski strokovni študij, diplomske naloge
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2. Double locking of an Escherichia coli promoter by two repressors prevents premature colicin expression and cell lysis
Matej Butala, Silva Sonjak, Simona Kamenšek, Milan Hodošček, Douglas F. Browning, Darja Žgur-Bertok, Steve J. W. Busby, 2012, original scientific article

Keywords: colicins, DNA damage, induction of gene expression, LexA regulon, transcription factor IscR
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3. Modeliranje učeče se organizacije s pomočjo molekularnega mrežnega pristopa
Matej Janežič, 2019, doctoral dissertation

Keywords: podjetje, poslovanje podjetja, učeča se organizacija, modeli, FUTURE-O, FUTURE-O-DYN, metode, informatika, simulacija, analiza
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4. Identification of triazolopyrimidinyl scaffold SARS-CoV-2 papain-like protease (PL$^{pro}$) inhibitor
Sebastjan Kralj, Marko Jukič, Miha Bahun, Luka Kranjc, Anja Kolarič, Milan Hodošček, Nataša Poklar Ulrih, Urban Bren, 2024, original scientific article

Keywords: drug design, protease inhibitor, SARS-CoV-2, papain-like protease, PL$^{pro}$, antiviral design, in silico drug design, CADD, virtual screening, HTVS, structure-based design
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