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Razvoj celičnega modela za detekcijo okoljskega stresa s kvantifikacijo morfologije mitohondrijev na slikah fluorescenčne mikroskopije
ID Šuštaršič, Teja (Avtor), ID Urbančič, Iztok (Mentor) Več o mentorju... Povezava se odpre v novem oknu, ID Kokot, Hana (Komentor)

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Izvleček
Mitohondriji so kompleksni organeli, ki sodelujejo v procesih presnove, apoptoze in signaliziranja znotraj celice. V procesu mitohondrijske fuzije se združujejo v večje mrežaste strukture, le-te pa lahko zaradi različnih dejavnikov v procesu mitohondrijske fizije ponovno razpadejo na manjše fragmente. Krajše mitohondrije povezujemo s povišanim oksidativnim stresom in razvojem patofizioloških procesov, kot so presnovne motnje, miopatije in nevrodegenerativne bolezni. Njihova morfologija tako dobro nakazuje na stanje celice, zato je natančna in objektivna kvantifikacija morfoloških značilnosti ključna za razumevanje in spremljanje bolezenskih procesov. Pristopi za vrednotenje fuzije in fizije mitohondrijev temeljijo na uporabi fluorescenčne mikroskopije. Razširjena je kvalitativna ocena, kjer ročno razvrstimo celice v ustrezno kategorijo glede na morfologijo mitohondrijev. Analiza je subjektivna in zamudna, zato so razvili računalniške algoritme, ki omogočajo objektivno kvantifikacijo mitohondrijske morfologije, vendar so le-ti omejeni glede na dostopnost in namen uporabe. Tako se pojavlja potreba po razvoju novih ali nadgradnji obstoječih algoritmov. V ta namen smo z razvojem algoritma v programu ImageJ nadgradili algoritem »MiNA«, ki omogoča kvantitativno analizo dolžine mitohondrijev na slikah fluorescenčne mikroskopije. Ustreznost celičnega modela smo preučevali pri treh celičnih linijah (LA-4, MH-S in MLg), izpostavljenih različnim koncentracijam H2O2 (0 mM, 0,3 mM in 3 mM) in medijem z različnim deležem hranil (LCIS (pufer, ki ne vsebuje hranil), kompletno celično gojišče ter mešanica LCIS in celičnega gojišča v razmerju 50:50). Celice smo izpostavili oksidativnemu stresu, za katerega smo predpostavili, da spodbuja fizijo mitohondrijev, in kratkotrajnemu stradanju, za kar smo domnevali, da pripomore k njihovi fuziji. Tretirane celice smo barvali s fluorescenčnim barvilom MitoTracker Green in jih opazovali s konfokalnim fluorescenčnim mikroskopom. Slike smo analizirali z nadgrajenim algoritmom, kjer smo v večini primerov s povečanjem oksidativnega stresa zaznali pričakovano krajšanje dolžine mitohondrijev. Kratkotrajno stradanje je opazno povzročilo podaljševanje mitohondrijev le v primeru, ko so bile celice izpostavljene dodatnemu stresorju (3 mM H2O2). Rezultati magistrskega dela so pokazali, da z razvitim algoritmom na osnovi celičnega modela zadovoljivo kvantificiramo morfologijo mitohondrijev in tako le-ta predstavlja ustrezno orodje za nadaljnjo preučevanje mehanizmov mitohondrijske dinamike ter uporabo v raziskavah celičnih odzivov na druge zunanje dejavnike.

Jezik:Slovenski jezik
Ključne besede:mitohondriji, fluorescenčna mikroskopija, oksidativni stres, celični model
Vrsta gradiva:Magistrsko delo/naloga
Organizacija:FFA - Fakulteta za farmacijo
Leto izida:2026
PID:20.500.12556/RUL-178668 Povezava se odpre v novem oknu
Datum objave v RUL:29.01.2026
Število ogledov:83
Število prenosov:21
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Sekundarni jezik

Jezik:Angleški jezik
Naslov:Development of a cellular model for environmental stress detection based on quantification of mitochondrial morphology from fluorescence microscopy images
Izvleček:
Mitochondria are complex organelles involved in cellular metabolism, apoptosis, and intracellular signaling. During mitochondrial fusion, they merge into larger interconnected networks, whereas various factors can trigger mitochondrial fission, causing these networks to break apart into smaller fragments. Shorter mitochondria are associated with elevated oxidative stress and the development of pathophysiological conditions such as metabolic disorders, myopathies, and neurodegenerative diseases. Their morphology therefore serves as a reliable indicator of cellular state, making precise and objective quantification of morphological traits essential for understanding and monitoring disease processes. Approaches for characterizing mitochondrial fusion and fission primarily rely on fluorescence microscopy. Qualitative assessment is a common method in which cells are manually categorized based on visual assessment of mitochondrial morphology. However, this type of analysis is subjective and time-consuming, leading to the development of computer algorithms that enable objective quantification of mitochondrial morphology - although these models are often inaccessible or limited to specific use cases. Consequently, there is a growing need for new algorithms or improved versions of existing ones. To address this, we enhanced the “MiNA” algorithm by developing an ImageJ-based algorithm that enables quantitative analysis of mitochondrial length in fluorescence microscopy images. We evaluated the suitability of our cellular model using three cell lines (LA-4, MH-S, and MLg), exposed to different concentrations of H2O2 (0 mM, 0.3 mM, and 3 mM) and to media containing varying levels of nutrients (LCIS (a nutrient-free buffer), complete cell culture medium, and a 50:50 mixture of LCIS and complete medium). Cells were subjected to oxidative stress, which we hypothesized would promote mitochondrial fission, and to short-term starvation, which we expected to promote mitochondrial fusion. Treated cells were stained with the fluorescent dye MitoTracker Green and imaged using a confocal fluorescence microscope. Image analysis performed with the upgraded algorithm revealed, in most cases, a consistent shortening of mitochondrial length with increasing oxidative stress. Short-term starvation resulted in mitochondrial elongation, but only when cells were simultaneously exposed to an additional stressor (3 mM H2O2). The results of the master’s thesis showed that the algorithm, based on the established cell model, provides reliable quantification of mitochondrial morphology and thus represents a suitable tool for further investigation of the mechanisms underlying mitochondrial dynamics, as well as for potential use in studies of cellular responses to less-explored external factors.

Ključne besede:mitochondria, fluorescence microscopy, oxidative stress, cellular model

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